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HCC1395BL_v1.0

Organism name:
Homo sapiens (human)
Isolate:
ATCC CRL-2325
Sex:
female
BioSample:
SAMN10102574
BioProject:
PRJNA489865
Submitter:
NCBI
Date:
2021/12/20
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_021234545.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAEOAY01
Assembly method:
Canu v. 1.8; ARCS v. 1.0.5; SALSA v. 22-May-2019
Expected final version:
yes
Genome coverage:
53.0x
Sequencing technology:
PacBio Sequel; Illumina HiSeq; 10X genomics; HiC

IDs: 11640511 [UID] 30652268 [GenBank]

See Genome Information for Homo sapiens

There are 1137 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,905,196,510
Total ungapped length2,904,905,829
Gaps between scaffolds0
Number of scaffolds1,645
Scaffold N5069,970,292
Scaffold L5014
Number of contigs2,860
Contig N5012,577,710
Contig L5060
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,645

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,905,179,9401,6442,904,889,25969,970,2921,2150
MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MT16,570116,57016,57000