mTamTet1.alt

Organism name:

Tamandua tetradactyla (southern tamandua)

Isolate:

mTamTet1

Sex:

male

BioSample:

SAMN12612337

BioProject:

PRJNA561940

Submitter:

Vertebrate Genomes Project

Date:

2022/06/22

Assembly type:

alternate-pseudohaplotype

Assembly level:

Scaffold

Genome representation:

full

GenBank assembly accession:

GCA_023853755.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

JAMSGJ01

Assembly method:

falcon-kit v. 1.3.0; FALCON-Unzip v. 1.2.0; purge_dups v. 1.2.3; scaff10x v. 4.2; bionano_solve v. Solve3.5_12162019; salsa v. 2.2; longranger v. 2.2.2; pbmm2 v. 1.4.0; gcpp v. 1.0.0-1807624; bcftools v. 1.12-21-ga865a16; merfin v. 09c026d; deepvariant v. 1.1.0; gEVAL manual curation v. 2022-02-03; VGP pipeline v. 1.7

Expected final version:

no

Genome coverage:

66.47x

Sequencing technology:

PacBio Sequel I CLR; Illumina NovaSeq; Bionano Genomics DLS; Arima Genomics Hi-C

Linked assembly:

GCA_023851605.1 (principal pseudohaplotype of diploid)

IDs: 13046241 [UID] 34050488 [GenBank]