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ASM3044067v1

Organism name:
Furcifer pardalis (lizards & snakes)
Isolate:
Fpa_1
Sex:
male
BioSample:
SAMN35298317
BioProject:
PRJNA974816
Submitter:
Institute of Zoology, Chinese Academy of Sciences
Date:
2023/07/12
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_030440675.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
Hifiasm v. November-2022; EndHic v. December-2022
Expected final version:
yes
Genome coverage:
38.0x
Sequencing technology:
PacBio Sequel IIe; DNBSEQ-T7

IDs: 17542051 [UID] 44918438 [GenBank]

See Genome Information for Furcifer pardalis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,609,777,135
Total ungapped length1,609,766,112
Gaps between scaffolds0
Number of scaffolds11
Scaffold N50184,669,281
Scaffold L504
Number of contigs23
Contig N50158,731,830
Contig L504
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)11

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_030440685.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP126890.1n/an/a
Chromosome 2CP126891.1n/an/a
Chromosome 3CP126892.1n/an/a
Chromosome 4CP126893.1n/an/a
Chromosome 5CP126894.1n/an/a
Chromosome 6CP126895.1n/an/a
Chromosome 7CP126896.1n/an/a
Chromosome 8CP126897.1n/an/a
Chromosome 9CP126898.1n/an/a
Chromosome 10CP126899.1n/an/a
Chromosome 11CP126900.1n/an/a

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All1,609,777,135111,609,766,112184,669,281120
Chromosome 1317,477,5491317,476,549317,477,54910
Chromosome 2272,440,7681272,437,768272,440,76830
Chromosome 3209,490,7321209,490,732209,490,73200
Chromosome 4184,669,2811184,668,281184,669,28110
Chromosome 5164,439,4821164,438,482164,439,48210
Chromosome 6119,133,6911119,132,691119,133,69110
Chromosome 7113,042,1581113,042,158113,042,15800
Chromosome 8111,427,5391111,426,539111,427,53910
Chromosome 963,061,479163,059,47963,061,47920
Chromosome 1036,791,312136,791,28936,791,31210
Chromosome 1117,803,144117,802,14417,803,14410