U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



rnor5.0_scrapheap

Organism name:
Rattus norvegicus (Norway rat)
BioSample:
SAMEA3696997
BioProject:
PRJEB12009
Submitter:
NKI
Date:
2016/01/28
Assembly level:
Scaffold
Genome representation:
partial
Excluded from RefSeq:
  • partial
GenBank assembly accession:
GCA_900014975.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
FBXV01
Genome coverage:
30x

IDs: 1122901 [UID] 4561518 [GenBank]

See Genome Information for Rattus norvegicus

There are 14 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length328,421,848
Total ungapped length203,599,372
Gaps between scaffolds0
Number of scaffolds365,167
Scaffold N50981
Scaffold L50104,348
Number of contigs1,156,492
Contig N50370
Contig L50157,073
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)365,167

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced328,421,848365,167203,599,372981791,3250