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34410_G01

Organism name:
Elizabethkingia anophelis (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC10588
BioSample:
SAMEA3121330
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/08/01
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900447425.1 (latest)
RefSeq assembly accession:
GCF_900447425.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
UFYD01
Genome coverage:
100x

IDs: 1843241 [UID] 6983028 [GenBank] 7005538 [RefSeq]

See Genome Information for Elizabethkingia anophelis

There are 687 assemblies for this organism

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History (Show revision history)

Comment

The organism was changed from 'Elizabethkingia meningoseptica' to 'Elizabethkingia anophelis' in July 2020.

Taxonomic-Update-Statistics

##Taxonomic-Update-Statistics-START##
This Genome (query)::GCA_900447425.1
Current Name::Elizabethkingia anophelis
Previous Name::Elizabethkingia meningoseptica
Date Updated::2020-07-31
Analysis Type::Average Nucleotide Identity (ANI)
Analysis 1 (A1)::Query vs. TYPE genome for current name
A1 Genome (subject)::GCA_002023665.2
A1 Name::Elizabethkingia anophelis
A1 ANI::98.55%
A1 Query Coverage::82.66%
A1 Subject Coverage::88.81%
Analysis 2 (A2)::Query vs. TYPE genome for previous name
A2 Genome (subject)::GCA_900475375.1
A2 Name::Elizabethkingia meningoseptica
A2 ANI::82.97%
A2 Query Coverage::37.11%
A2 Subject Coverage::41.75%
##Taxonomic-Update-Statistics-END##

Global statistics

Total sequence length4,360,190
Total ungapped length4,360,190
Number of contigs3
Contig N504,276,887
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,360,19034,360,1904,276,88700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Elizabethkingia anophelisElizabethkingia anophelis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_002023665.2Elizabethkingia anophelis R26type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002023665.2Elizabethkingia anophelistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.5582.6688.81
Best-match type98.5582.6688.81

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna