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44310_D01

Organism name:
Canicola haemoglobinophilus (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC10619
BioSample:
SAMEA3867449
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/08/01
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900450835.1 (latest)
RefSeq assembly accession:
GCF_900450835.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
UGHE01
Genome coverage:
100x

IDs: 1848551 [UID] 6995008 [GenBank] 7018578 [RefSeq]

See Genome Information for Canicola haemoglobinophilus

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,396,110
Total ungapped length2,396,110
Number of contigs2
Contig N502,370,692
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,396,11022,396,1102,370,69200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Canicola haemoglobinophilusCanicola haemoglobinophilus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900450725.1Canicola haemoglobinophilustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900450725.1Canicola haemoglobinophilustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.7091.1489.64
Best-match type98.7091.1489.64

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna