U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



58174_D01

Organism name:
Klebsiella pneumoniae (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC13687
BioSample:
SAMEA104307701
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/06/30
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • annotation fails completeness check
GenBank assembly accession:
GCA_900451645.1 (latest)
RefSeq assembly accession:
GCF_900451645.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
UAWP01
Genome coverage:
100x

IDs: 1787221 [UID] 6756648 [GenBank] 9064638 [RefSeq]

See Genome Information for Klebsiella pneumoniae

There are 65463 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,389,641
Total ungapped length5,389,641
Number of contigs29
Contig N50284,353
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)29

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,389,641295,389,641284,35300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Klebsiella pneumoniaeKlebsiella pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001598715.1Klebsiella pneumoniae subsp. ozaenae NBRC 105683type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001598715.1Klebsiella pneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9291.2595.02
Best-match type99.9291.2595.02

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna