U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



MGYG-HGUT-00029

Organism name:
Bacteroides finegoldii (CFB group bacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-00029
BioSample:
SAMEA5849530
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902362535.1 (latest)
RefSeq assembly accession:
GCF_902362535.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABIXA01
Genome coverage:
10x

IDs: 4416721 [UID] 13386938 [GenBank] 13435658 [RefSeq]

See Genome Information for Bacteroides finegoldii

There are 53 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,418,465
Total ungapped length4,415,868
Gaps between scaffolds0
Number of scaffolds40
Scaffold N50238,385
Scaffold L507
Number of contigs50
Contig N50139,653
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)40

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,418,465404,415,868238,385100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacteroides finegoldiiBacteroides finegoldii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_030295565.1Bacteroides finegoldii DSM 17565suspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_030295565.1Bacteroides finegoldiisuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9278.0969.63
Best-match type98.9278.0969.63

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna