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MGYG-HGUT-00027

Organism name:
Mitsuokella jalaludinii (firmicutes)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-00027
BioSample:
SAMEA5849528
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902362545.1 (latest)
RefSeq assembly accession:
GCF_902362545.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABIWZ01
Genome coverage:
10x

IDs: 4416801 [UID] 13387098 [GenBank] 13442098 [RefSeq]

See Genome Information for Mitsuokella jalaludinii

There are 77 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,395,159
Total ungapped length2,393,571
Gaps between scaffolds0
Number of scaffolds46
Scaffold N50116,897
Scaffold L506
Number of contigs52
Contig N50109,196
Contig L509
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)46

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,395,159462,393,571116,89760

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Mitsuokella jalaludiniiMitsuokella jalaludinii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000702905.1Mitsuokella jalaludinii DSM 13811type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000702905.1Mitsuokella jalaludiniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.1989.9789.26
Best-match type98.1989.9789.26

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna