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MGYG-HGUT-00082

Organism name:
Acinetobacter lwoffii (g-proteobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-00082
BioSample:
SAMEA5849583
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902363005.1 (latest)
RefSeq assembly accession:
GCF_902363005.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABIYT01
Genome coverage:
10x

IDs: 4417041 [UID] 13387578 [GenBank] 13436418 [RefSeq]

See Genome Information for Acinetobacter lwoffii

Pathogen Detection Resources

There are 77 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,378,741
Total ungapped length3,378,591
Gaps between scaffolds0
Number of scaffolds124
Scaffold N5080,144
Scaffold L5014
Number of contigs129
Contig N5080,144
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)124

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,378,7411243,378,59180,14450

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter lwoffiiAcinetobacter lwoffii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_019048305.1Acinetobacter lwoffiitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_019048305.1Acinetobacter lwoffiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type96.2383.3480.34
Best-match type96.2383.3480.34

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna