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MGYG-HGUT-00105

Organism name:
Bacteroides clarus (CFB group bacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-00105
BioSample:
SAMEA5849606
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902363315.1 (latest)
RefSeq assembly accession:
GCF_902363315.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABIZW01
Genome coverage:
10x

IDs: 4417251 [UID] 13387998 [GenBank] 13437458 [RefSeq]

See Genome Information for Bacteroides clarus

Pathogen Detection Resources

There are 41 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,966,587
Total ungapped length3,966,084
Gaps between scaffolds0
Number of scaffolds21
Scaffold N50655,330
Scaffold L503
Number of contigs23
Contig N50655,330
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)21

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,966,587213,966,084655,33020

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacteroides clarusBacteroides clarus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900129655.1Bacteroides clarus YIT 12056type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900129655.1Bacteroides clarustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9981.5986.33
Best-match type98.9981.5986.33

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna