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Source database (GenBank or RefSeq) File type

MGYG-HGUT-00166

Organism name:: Limosilactobacillus fermentum (firmicutes)
Taxonomy check:: OK
Isolate:: MGYG-HGUT-00166
BioSample:: SAMEA5849667
BioProject:: PRJEB33885
Submitter:: EMG
Date:: 2019/08/22
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_902363965.1 (latest)
RefSeq assembly accession:: GCF_902363965.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: CABJBV01
Genome coverage:: 10x

IDs: 4417511 [UID] 13388518 [GenBank] 13441418 [RefSeq]

See Genome Information for Limosilactobacillus fermentum

Pathogen Detection Resources

There are 341 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_902363965.1	=	GCF_902363965.1	MGYG-HGUT-00166	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,968,193
Total ungapped length	1,967,637
Gaps between scaffolds	0
Number of scaffolds	80
Scaffold N50	62,108
Scaffold L50	10
Number of contigs	100
Contig N50	55,235
Contig L50	12
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	80

	ANI	Query coverage	Subject coverage
Declared type	99.25	86.13	88.95
Best-match type	99.25	86.13	88.95

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MGYG-HGUT-00166

See Genome Information for Limosilactobacillus fermentum

Pathogen Detection Resources

There are 341 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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