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MGYG-HGUT-01326

Organism name:
Fusobacterium nucleatum (fusobacteria)
Taxonomy check:
Inconclusive
Isolate:
MGYG-HGUT-01326
BioSample:
SAMEA5850829
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902373855.1 (latest)
RefSeq assembly accession:
GCF_902373855.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKNP01
Genome coverage:
10x

IDs: 4418491 [UID] 13390478 [GenBank] 15735508 [RefSeq]

See Genome Information for Fusobacterium nucleatum

There are 169 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,514,029
Total ungapped length2,514,029
Number of contigs2
Contig N502,507,720
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,514,02922,514,0292,507,72000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Fusobacterium nucleatumFusobacterium nucleatum

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_031191795.1Fusobacterium nucleatumsuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000220825.1Fusobacterium animalissuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type91.6966.8176.98
Best-match type96.7870.7978.42

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchcoverage is less than 80%