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MGYG-HGUT-01318

Organism name:
Enterobacter cancerogenus (enterobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01318
BioSample:
SAMEA5850821
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902373965.1 (latest)
RefSeq assembly accession:
GCF_902373965.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKNU01
Genome coverage:
10x

IDs: 4418591 [UID] 13390678 [GenBank] 13439218 [RefSeq]

See Genome Information for Enterobacter cancerogenus

Pathogen Detection Resources

There are 35 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,638,653
Total ungapped length4,633,453
Gaps between scaffolds0
Number of scaffolds10
Scaffold N501,031,480
Scaffold L502
Number of contigs62
Contig N50330,219
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)10

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced4,638,653104,633,4531,031,480520

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterobacter cancerogenusEnterobacter cancerogenus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_019047785.1Enterobacter cancerogenustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_019047785.1Enterobacter cancerogenustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9294.2190.53
Best-match type98.9294.2190.53

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna