U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



MGYG-HGUT-01343

Organism name:
Acinetobacter junii (g-proteobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01343
BioSample:
SAMEA5850846
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902374105.1 (latest)
RefSeq assembly accession:
GCF_902374105.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKOY01
Genome coverage:
10x

IDs: 4343461 [UID] 13219188 [GenBank] 13319478 [RefSeq]

See Genome Information for Acinetobacter junii

Pathogen Detection Resources

There are 115 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,463,059
Total ungapped length3,338,932
Gaps between scaffolds0
Number of scaffolds44
Scaffold N501,986,327
Scaffold L501
Number of contigs176
Contig N5043,774
Contig L5023
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)44

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,463,059443,338,9321,986,3271320

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter juniiAcinetobacter junii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900444875.1Acinetobacter juniitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900444875.1Acinetobacter juniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.1984.8284.26
Best-match type98.1984.8284.26

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna