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MGYG-HGUT-01362

Organism name:
Streptococcus anginosus (firmicutes)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01362
BioSample:
SAMEA5850865
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902374285.1 (latest)
RefSeq assembly accession:
GCF_902374285.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKPH01
Genome coverage:
10x

IDs: 4418791 [UID] 13391078 [GenBank] 13444258 [RefSeq]

See Genome Information for Streptococcus anginosus

Pathogen Detection Resources

There are 347 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,821,055
Total ungapped length1,815,537
Gaps between scaffolds0
Number of scaffolds7
Scaffold N501,137,758
Scaffold L501
Number of contigs18
Contig N50150,168
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,821,05571,815,5371,137,758110

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus anginosusStreptococcus anginosus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900636475.1Streptococcus anginosustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900636475.1Streptococcus anginosustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type95.6788.6682.40
Best-match type95.6788.6682.40

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna