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MGYG-HGUT-01376

Organism name:
Dysgonomonas gadei (CFB group bacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01376
BioSample:
SAMEA5850879
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902374305.1 (latest)
RefSeq assembly accession:
GCF_902374305.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKPQ01
Genome coverage:
10x

IDs: 4418901 [UID] 13391298 [GenBank] 13439278 [RefSeq]

See Genome Information for Dysgonomonas gadei

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,176,087
Total ungapped length5,165,995
Gaps between scaffolds0
Number of scaffolds25
Scaffold N50413,047
Scaffold L504
Number of contigs65
Contig N50180,982
Contig L509
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)25

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,176,087255,165,995413,047400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Dysgonomonas gadeiDysgonomonas gadei

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000213555.1Dysgonomonas gadei ATCC BAA-286type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000213555.1Dysgonomonas gadeitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.99100.00100.00
Best-match type99.99100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna