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MGYG-HGUT-01371

Organism name:
Paenibacillaceae bacterium (firmicutes)
Taxonomy check:
Inconclusive
Isolate:
MGYG-HGUT-01371
BioSample:
SAMEA5850874
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • genus undefined
GenBank assembly accession:
GCA_902374405.1 (latest)
RefSeq assembly accession:
GCF_902374405.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKPW01
Genome coverage:
10x

IDs: 4418861 [UID] 13391218 [GenBank] 13439978 [RefSeq]

See Genome Information for Paenibacillaceae bacterium

Pathogen Detection Resources

There are 21 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length6,950,059
Total ungapped length6,950,059
Number of contigs185
Contig N5065,575
Contig L5035
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)185

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced6,950,0591856,950,05965,57500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Paenibacillaceae bacteriumPaenibacillaceae bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_004000945.1Paenibacillus lautussuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type89.1875.8974.68

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna