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MGYG-HGUT-01381

Organism name:
Neisseria macacae (b-proteobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01381
BioSample:
SAMEA5850884
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902374455.1 (latest)
RefSeq assembly accession:
GCF_902374455.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKQF01
Genome coverage:
10x

IDs: 4343551 [UID] 13219608 [GenBank] 13332528 [RefSeq]

See Genome Information for Neisseria macacae

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,748,368
Total ungapped length2,684,269
Gaps between scaffolds0
Number of scaffolds66
Scaffold N50283,360
Scaffold L503
Number of contigs198
Contig N5025,189
Contig L5031
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)66

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,748,368662,684,269283,3601320

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neisseria macacaeNeisseria macacae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000220865.1Neisseria macacae ATCC 33926type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000220865.1Neisseria macacaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.00100.00100.00
Best-match type100.00100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna