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MGYG-HGUT-01451

Organism name:
Paenibacillus antibioticophila (firmicutes)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01451
BioSample:
SAMEA5850954
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902375095.1 (latest)
RefSeq assembly accession:
GCF_902375095.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKSR01
Genome coverage:
10x

IDs: 4419261 [UID] 13392018 [GenBank] 13440778 [RefSeq]

See Genome Information for Paenibacillus antibioticophila

Pathogen Detection Resources

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,584,690
Total ungapped length5,572,970
Gaps between scaffolds0
Number of scaffolds9
Scaffold N503,049,380
Scaffold L501
Number of contigs91
Contig N50117,008
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)9

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,584,69095,572,9703,049,380820

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Paenibacillus antibioticophilaPaenibacillus antibioticophila

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000455265.1Paenibacillus antibioticophilatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000455265.1Paenibacillus antibioticophilatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.99100.00100.00
Best-match type99.99100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna