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MGYG-HGUT-01455

Organism name:
Faecalitalea cylindroides (firmicutes)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01455
BioSample:
SAMEA5850958
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902375185.1 (latest)
RefSeq assembly accession:
GCF_902375185.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKSV01
Genome coverage:
10x

IDs: 4419281 [UID] 13392058 [GenBank] 13441058 [RefSeq]

See Genome Information for Faecalitalea cylindroides

There are 32 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,946,426
Total ungapped length1,944,726
Gaps between scaffolds0
Number of scaffolds126
Scaffold N5045,531
Scaffold L5015
Number of contigs143
Contig N5042,016
Contig L5016
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)126

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,946,4261261,944,72645,531170

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Faecalitalea cylindroidesFaecalitalea cylindroides

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000469305.1Faecalitalea cylindroides ATCC 27803type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000469305.1Faecalitalea cylindroidestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.00100.00100.00
Best-match type100.00100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna