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MGYG-HGUT-01539

Organism name:
Neglectibacter timonensis (firmicutes)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-01539
BioSample:
SAMEA5851042
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902375885.1 (latest)
RefSeq assembly accession:
GCF_902375885.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKVV01
Genome coverage:
10x

IDs: 4344271 [UID] 13221768 [GenBank] 13324928 [RefSeq]

See Genome Information for Neglectibacter timonensis

There are 8 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,671,597
Total ungapped length3,671,396
Gaps between scaffolds0
Number of scaffolds14
Scaffold N50853,189
Scaffold L502
Number of contigs15
Contig N50853,189
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)14

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,671,597143,671,396853,18910

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neglectibacter timonensisNeglectibacter timonensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900048895.1Neglectibacter timonensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900048895.1Neglectibacter timonensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.00100.00100.00
Best-match type100.00100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna