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MGYG-HGUT-01531

Organism name:
Clostridiaceae bacterium (firmicutes)
Taxonomy check:
Inconclusive
Isolate:
MGYG-HGUT-01531
BioSample:
SAMEA5851034
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • genus undefined
GenBank assembly accession:
GCA_902375945.1 (latest)
RefSeq assembly accession:
GCF_902375945.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABKVR01
Genome coverage:
10x

IDs: 4344281 [UID] 13221828 [GenBank] 13322248 [RefSeq]

See Genome Information for Clostridiaceae bacterium

There are 466 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,412,690
Total ungapped length3,412,690
Number of contigs8
Contig N501,822,226
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,412,69083,412,6901,822,22600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Clostridiaceae bacteriumClostridiaceae bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_013282095.1Enterocloster alcoholdehydrogenatitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type83.7427.6124.76

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna