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Source database (GenBank or RefSeq) File type

MGYG-HGUT-01556

Organism name:: Acidaminococcus massiliensis (firmicutes)
Taxonomy check:: OK
Isolate:: MGYG-HGUT-01556
BioSample:: SAMEA5851059
BioProject:: PRJEB33885
Submitter:: EMG
Date:: 2019/08/16
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_902376135.1 (latest)
RefSeq assembly accession:: GCF_902376135.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: CABKWK01
Genome coverage:: 10x

IDs: 4344331 [UID] 13221948 [GenBank] 13315118 [RefSeq]

See Genome Information for Acidaminococcus massiliensis

Pathogen Detection Resources

There are 10 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_902376135.1	=	GCF_902376135.1	MGYG-HGUT-01556	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	2,669,996
Total ungapped length	2,669,278
Gaps between scaffolds	0
Number of scaffolds	4
Scaffold N50	2,625,322
Scaffold L50	1
Number of contigs	8
Contig N50	499,265
Contig L50	2
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	4

	ANI	Query coverage	Subject coverage
Declared type	100.00	100.00	100.00
Best-match type	100.00	100.00	100.00

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MGYG-HGUT-01556

See Genome Information for Acidaminococcus massiliensis

Pathogen Detection Resources

There are 10 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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