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UHGG_MGYG-HGUT-02161

Organism name:
Methanomassiliicoccus luminyensis (archaea)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-02161
BioSample:
SAMEA5851665
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902383895.1 (latest)
RefSeq assembly accession:
GCF_902383895.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABLZR01
Genome coverage:
10x

IDs: 4349511 [UID] 13232408 [GenBank] 13338058 [RefSeq]

See Genome Information for Methanomassiliicoccus luminyensis

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,620,233
Total ungapped length2,620,233
Number of contigs26
Contig N50167,531
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)26

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,620,233262,620,233167,53100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Methanomassiliicoccus luminyensisMethanomassiliicoccus luminyensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000308215.1Methanomassiliicoccus luminyensis B10type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000308215.1Methanomassiliicoccus luminyensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.00100.00100.00
Best-match type100.00100.00100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna