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UHGG_MGYG-HGUT-02368

Organism name:
Vibrio metoecus (g-proteobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-02368
BioSample:
SAMEA5851872
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902386355.1 (latest)
RefSeq assembly accession:
GCF_902386355.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABMIR01
Genome coverage:
10x

IDs: 4351631 [UID] 13236648 [GenBank] 13339438 [RefSeq]

See Genome Information for Vibrio metoecus

There are 34 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,946,363
Total ungapped length3,946,363
Number of contigs84
Contig N5095,774
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)84

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,946,363843,946,36395,77400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Vibrio metoecusVibrio metoecus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000696385.1Vibrio metoecustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000696385.1Vibrio metoecustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.4292.1791.78
Best-match type97.4292.1791.78

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna