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UHGG_MGYG-HGUT-02464

Organism name:
Acetivibrio ethanolgignens (firmicutes)
Taxonomy check:
Inconclusive
Isolate:
MGYG-HGUT-02464
BioSample:
SAMEA5851969
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902387445.1 (latest)
RefSeq assembly accession:
GCF_902387445.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABMMD01
Genome coverage:
10x

IDs: 4352681 [UID] 13238748 [GenBank] 13317158 [RefSeq]

See Genome Information for Acetivibrio ethanolgignens

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,660,245
Total ungapped length3,659,620
Gaps between scaffolds0
Number of scaffolds229
Scaffold N5047,584
Scaffold L5023
Number of contigs284
Contig N5045,085
Contig L5027
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)229

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,660,2452293,659,62047,584550

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acetivibrio ethanolgignensAcetivibrio ethanolgignens

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900086725.1Bariatricus massiliensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type95.700.930.81

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena