U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



UHGG_MGYG-HGUT-02503

Organism name:
Enterobacter ludwigii (enterobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-02503
BioSample:
SAMEA5852008
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902387865.1 (latest)
RefSeq assembly accession:
GCF_902387865.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABMNI01
Genome coverage:
10x

IDs: 4353101 [UID] 13239588 [GenBank] 15520688 [RefSeq]

See Genome Information for Enterobacter ludwigii

There are 260 assemblies for this organism

See more

History (Show revision history)

Comment

The organism was changed from 'Enterobacter cloacae' to 'Enterobacter ludwigii' in June 2020.

Taxonomic-Update-Statistics

##Taxonomic-Update-Statistics-START##
This Genome (query)::GCA_902387865.1
Current Name::Enterobacter ludwigii
Previous Name::Enterobacter cloacae
Date Updated::2020-06-25
Analysis Type::Average Nucleotide Identity (ANI)
Analysis 1 (A1)::Query vs. TYPE genome for current name
A1 Genome (subject)::GCA_000818595.1
A1 Name::Enterobacter ludwigii
A1 ANI::98.97%
A1 Query Coverage::94.9%
A1 Subject Coverage::90.01%
Analysis 2 (A2)::Query vs. TYPE genome for previous name
A2 Genome (subject)::GCA_009660455.1
A2 Name::Enterobacter cloacae
A2 ANI::88.27%
A2 Query Coverage::84.62%
A2 Subject Coverage::82.08%
##Taxonomic-Update-Statistics-END##

Global statistics

Total sequence length4,697,885
Total ungapped length4,697,885
Number of contigs26
Contig N50332,883
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)26

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,697,885264,697,885332,88300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterobacter ludwigiiEnterobacter ludwigii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000818595.1Enterobacter ludwigiitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000818595.1Enterobacter ludwigiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9694.9090.01
Best-match type98.9694.9090.01

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna