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Source database (GenBank or RefSeq) File type

UHGG_MGYG-HGUT-02525

Organism name:: Yersinia intermedia (enterobacteria)
Taxonomy check:: OK
Isolate:: MGYG-HGUT-02525
BioSample:: SAMEA5852030
BioProject:: PRJEB33885
Submitter:: EMG
Date:: 2019/08/16
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_902388045.1 (latest)
RefSeq assembly accession:: GCF_902388045.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: CABMNY01
Genome coverage:: 10x

IDs: 4353261 [UID] 13239908 [GenBank] 13341178 [RefSeq]

See Genome Information for Yersinia intermedia

Pathogen Detection Resources

There are 46 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_902388045.1	=	GCF_902388045.1	UHGG_MGYG-HGUT-02525	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	5,023,250
Total ungapped length	5,023,222
Gaps between scaffolds	0
Number of scaffolds	48
Scaffold N50	254,199
Scaffold L50	8
Number of contigs	50
Contig N50	229,683
Contig L50	8
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	48

	ANI	Query coverage	Subject coverage
Declared type	99.42	86.86	91.72
Best-match type	99.42	86.86	91.72

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UHGG_MGYG-HGUT-02525

See Genome Information for Yersinia intermedia

Pathogen Detection Resources

There are 46 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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