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UHGG_MGYG-HGUT-02527

Organism name:
Aeromonas caviae (g-proteobacteria)
Taxonomy check:
OK
Isolate:
MGYG-HGUT-02527
BioSample:
SAMEA5852032
BioProject:
PRJEB33885
Submitter:
EMG
Date:
2019/08/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902388085.1 (latest)
RefSeq assembly accession:
GCF_902388085.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABMOA01
Genome coverage:
10x

IDs: 4353301 [UID] 13239988 [GenBank] 13317678 [RefSeq]

See Genome Information for Aeromonas caviae

There are 460 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,477,475
Total ungapped length4,477,475
Number of contigs34
Contig N50369,568
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)34

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,477,475344,477,475369,56800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Aeromonas caviaeAeromonas caviae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900476005.1Aeromonas caviaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900476005.1Aeromonas caviaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.9991.7689.58
Best-match type97.9991.7689.58

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna