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IDs: 274678 [UID] 167478 [GenBank] 274678 [RefSeq]
URL -- http://www.jgi.doe.gov JGI Project ID: 4086088 Source DNA available from Ann M. Hirsch (ahirsch@ucla.edu) Organism available from ATCC: ATCC 27029 Contacts: Ann M. Hirsch (ahirsch@ucla.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles ... for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/ more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Date::04/27/2023 01:35:35Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.5Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::6,375CDSs (total)::6,311Genes (coding)::6,249CDSs (with protein)::6,249Genes (RNA)::64rRNAs::3, 3, 3 (5S, 16S, 23S)complete rRNAs::3, 3, 3 (5S, 16S, 23S)tRNAs::52ncRNAs::3Pseudo Genes (total)::62CDSs (without protein)::62Pseudo Genes (ambiguous residues)::0 of 62Pseudo Genes (frameshifted)::26 of 62Pseudo Genes (incomplete)::43 of 62Pseudo Genes (internal stop)::4 of 62Pseudo Genes (multiple problems)::10 of 62##Genome-Annotation-Data-END##
##MIGS-Data-START##investigation_type::bacteria_archaeaproject_name::Micromonospora aurantiaca ATCC 27029collection_date::Missinglat_lon::Missingdepth::Missingalt_elev::Missingcountry::Missingenvironment::Soilnum_replicons::1ref_biomaterial::ATCC 27029, DSM 43813biotic_relationship::Free livingtrophic_level::Missingrel_to_oxygen::Aerobeisol_growth_condt::Missingsequencing_meth::WGSassembly::Newbler v. 2.3 (pre-release)finishing_strategy::FinishedGOLD Stamp ID::Gi02094Type Strain::YesGreengenes ID::12856Funding Program::DOE-CSP 2008Isolation Site::SoilSporulation::SporulatingTemperature Range::MesophileTemperature Optimum::37CGram Staining::Gram+Diseases::None##MIGS-Data-END##
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