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ASM20922v1

Organism name:
Nematostella vectensis (starlet sea anemone)
Infraspecific name:
Strain: CH2 x CH6
BioSample:
SAMN02953687
BioProject:
PRJNA12581
Submitter:
DOE Joint Genome Institute (JGI)
Date:
2007/08/22
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000209225.1 (latest)
RefSeq assembly accession:
GCF_000209225.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABAV01

IDs: 271748 [UID] 271728 [GenBank] 271748 [RefSeq]

See Genome Information for Nematostella vectensis

History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov/nematostella
JGI Project ID: 3633980
Source DNA and stock culture is available from Ulrich Technau (Ulrich.Technau@sars.uib.no)
Contacts: Daniel Rokhsar (DSRokhsar@lbl.gov)
Annotation done by JGI-PGF
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted ... by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length356,613,585
Total ungapped length297,398,056
Gaps between scaffolds0
Number of scaffolds10,804
Scaffold N50472,588
Scaffold L50181
Number of contigs59,149
Contig N5019,835
Contig L503,617
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)59,149

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced356,613,58510,804297,398,056472,58848,3450
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