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Source database (GenBank or RefSeq) File type

CLC_glsol112

Organism name:: Leptospira interrogans serovar Copenhageni str. Fiocruz LV2776 (bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: Fiocruz LV2776
BioSample:: SAMN00254333
BioProject:: PRJNA63753
Submitter:: J. Craig Venter Institute
Date:: 2011/06/07
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000217135.2 (latest)
RefSeq assembly accession:: GCF_000217135.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AFKG01
Assembly method:: CLC NGS Cell v. 3.20.50819
Genome coverage:: 86.47x
Sequencing technology:: Illumina Paired-End GAIIX

IDs: 543118 [UID] 345368 [GenBank] 543118 [RefSeq]

See Genome Information for Leptospira interrogans

Pathogen Detection Resources

There are 396 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000217135.2	=	GCF_000217135.1	CLC_glsol112	Scaffold	Latest GenBank, Latest RefSeq
GCA_000217135.1	n/a	n/a	CLC_glsol112	Scaffold	GenBank suppressed

Comment

This work was supported by the National Institute of Allergy and Infectious Diseases (NIAID), Genome Sequencing Centers for Infectious Diseases (GSCID) program.

Global statistics

Total sequence length	4,552,876
Total ungapped length	4,552,501
Gaps between scaffolds	0
Number of scaffolds	248
Scaffold N50	35,832
Scaffold L50	41
Number of contigs	274
Contig N50	32,123
Contig L50	45
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	248

	ANI	Query coverage	Subject coverage
Declared type	99.96	99.27	98.25
Best-match type	99.96	99.27	98.25

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CLC_glsol112

See Genome Information for Leptospira interrogans

Pathogen Detection Resources

There are 396 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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