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IDs: 1497921 [UID] 1182248 [GenBank] 5812968 [RefSeq]
This less-fragmented assembly (called as the KH assmebly) was generated from the version 1 assembly by an evidence-based process of scaffold joining, coupled with the removal of small scaffolds that did not appear to contain expressed genes or that ... appeared to be variant duplicates of regions better represented in other scaffolds. The largest scaffolds representing each of Ciona's 14 chromosomes are named KHCx, where x is the chromosome number. See detailed assembly procedure and nomenclature in the reference. The KH assembly can be browsed in the Ghost Database. URL: http://ghost.zool.kyoto-u.ac.jp/indexr1.html This submitted assembly sequence is slightly different from the original KH assembly. Short (<20nt) sequences intervened between two gap sequences (or between a gap and a scaffold end) are replaced with stretches of 'N's. The original KH assembly is available in the above web site. more
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