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AstBur1.0

Organism name:
Haplochromis burtoni (Burton's mouthbrooder)
Isolate:
A. burtoni ID#24_Hofmann
Sex:
female
BioSample:
SAMN00139641
BioProject:
PRJNA60363
Submitter:
Broad Institute
Date:
2011/12/22
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000239415.1 (latest)
RefSeq assembly accession:
GCF_000239415.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AFNZ01
Assembly method:
ALLPATHS-LG v. R35951
Genome coverage:
131x
Sequencing technology:
Illumina HiSeq

IDs: 322368 [UID] 322368 [GenBank] 789238 [RefSeq]

See Genome Information for Haplochromis burtoni

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Sequenced and assembled at the Broad Institute. The sequenced animal was provided by Dr. Hans Hofmann at the University of Texas.

Global statistics

Total sequence length831,411,547
Total ungapped length698,949,643
Gaps between scaffolds0
Number of scaffolds8,001
Scaffold N501,194,190
Scaffold L50181
Number of contigs69,074
Contig N5021,886
Contig L508,930
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)69,074

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced831,411,5478,001698,949,6431,194,19061,0730