U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Wallemia sebi v1.0

Organism name:
Wallemia mellicola CBS 633.66 (basidiomycetes)
Infraspecific name:
Strain: CBS 633.66
BioSample:
SAMN02769629
BioProject:
PRJNA64975
Submitter:
JGI
Date:
2012/05/29
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000263375.1 (latest)
RefSeq assembly accession:
GCF_000263375.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AFQX01
Assembly method:
Newbler v. 2.3 (pre-release 9/14/2009)
Genome coverage:
71x
Sequencing technology:
454; Illumina

IDs: 382478 [UID] 382478 [GenBank] 954548 [RefSeq]

See Genome Information for Wallemia mellicola

There are 26 assemblies for this organism

See more

History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov/Wallemia
JGI Project ID: 4088465
The DNA was provided by M. Catherine Aime (maime@agcenter.lsu.edu)
The strain is available from CBS-KNAW Fungal Biodiversity Center (http://www.cbs.knaw.nl) under CBS 633.66
Contacts: M. Catherine Aime (maime@agcenter.lsu.edu)
 Igor Grigoriev (ivgrigoriev@lbl.gov)
Assembly and annotation done by JGI.

Global statistics

Total sequence length9,815,586
Total ungapped length9,798,416
Gaps between scaffolds0
Number of scaffolds56
Scaffold N50337,420
Scaffold L509
Number of contigs106
Contig N50255,921
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)106

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,815,586569,798,416337,420500
Support Center