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Ptep_3.0

Organism name:
Parasteatoda tepidariorum (common house spider)
Infraspecific name:
Strain: Goettingen
BioSample:
SAMN02364452
BioProject:
PRJNA167405
Submitter:
The i5k Initiative
Date:
2019/06/14
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000365465.3 (latest)
RefSeq assembly accession:
GCF_000365465.3 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AOMJ03
Assembly method:
AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2; redundans v. 0.12c
Expected final version:
no
Genome coverage:
96.9x
Sequencing technology:
Illumina HiSeq

IDs: 4009881 [UID] 12471228 [GenBank] 28197088 [RefSeq]

See Genome Information for Parasteatoda tepidariorum

History (Show revision history)

Comment

Global statistics

Total sequence length1,228,972,128
Total ungapped length1,209,990,961
Gaps between scaffolds0
Number of scaffolds59,853
Scaffold N50765,179
Scaffold L50414
Number of contigs84,235
Contig N5066,479
Contig L505,082
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)84,235

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,228,972,12859,8531,209,990,961765,17924,3820