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Diaci psyllid genome assembly version 1.1

Organism name:
Diaphorina citri (Asian citrus psyllid)
BioSample:
SAMN00100712
BioProject:
PRJNA29447
Submitter:
International Psyllid Genome Consortium
Date:
2013/10/22
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Excluded from RefSeq:
  • genome length too large
GenBank assembly accession:
GCA_000475195.1 (latest)
RefSeq assembly accession:
GCF_000475195.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AWGM01
Assembly method:
PBJelly v. 2013
Genome coverage:
180.0x
Sequencing technology:
Illumina HiSeq; PacBio

IDs: 70081 [UID] 822978 [GenBank] 1092578 [RefSeq]

See Genome Information for Diaphorina citri

Pathogen Detection Resources

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length485,705,082
Total ungapped length466,369,913
Gaps between scaffolds0
Number of scaffolds161,988
Scaffold N50109,898
Scaffold L501,096
Number of contigs176,470
Contig N5034,407
Contig L503,424
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)176,470

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced485,705,082161,988466,369,913109,89814,4820