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Clec_2.1

Organism name:
Cimex lectularius (bed bug)
Infraspecific name:
Strain: Harlan
Isolate:
CLEC.00
Sex:
male
BioSample:
SAMN02649412
BioProject:
PRJNA167477
Submitter:
The i5k Initiative
Date:
2017/12/12
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000648675.3 (latest)
RefSeq assembly accession:
GCF_000648675.2 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JHUN02
Assembly method:
AllPaths LG v. 35218; Atlas Link v. 1.0; Atlas GapFill v. 2.2; redundans v. 0.12c
Expected final version:
no
Genome coverage:
163.4x
Sequencing technology:
Illumina

IDs: 1561531 [UID] 6020068 [GenBank] 6026008 [RefSeq]

See Genome Information for Cimex lectularius

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length510,848,842
Total ungapped length510,407,575
Gaps between scaffolds0
Number of scaffolds1,574
Scaffold N501,637,644
Scaffold L50100
Number of contigs2,869
Contig N50552,423
Contig L50285
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,869

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced510,833,6251,573510,392,3581,637,6441,2950
MoleculeTotal
Length
Mitochondrion MT15,217