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Source database (GenBank or RefSeq) File type

ASM69924v1

Organism name:: Pterocles gutturalis (yellow-throated sandgrouse)
Isolate:: BGI_N339
Sex:: male
BioSample:: SAMN02339892
BioProject:: PRJNA212906
Submitter:: BGI
Date:: 2014/06/09
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_000699245.1 (latest)
RefSeq assembly accession:: GCF_000699245.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JMFR01
Assembly method:: SOAPdenovo v. 1.6
Genome coverage:: 25x
Sequencing technology:: Illumina HiSeq

IDs: 182841 [UID] 1104618 [GenBank] 1367118 [RefSeq]

See Genome Information for Pterocles gutturalis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Annotation was added to this genome in September, 2014.

Global statistics

Total sequence length	1,069,324,295
Total ungapped length	1,065,718,737
Gaps between scaffolds	0
Number of scaffolds	58,607
Scaffold N50	49,530
Scaffold L50	6,164
Number of contigs	107,160
Contig N50	26,448
Contig L50	12,048
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	107,160

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Assembly Information

Related Information

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Nucleotide INSDC
Nucleotide INSDC (GenBank)
Nucleotide RefSeq
Nucleotide RefSeq
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Taxonomy
Taxonomy
WGS Master
WGS Master

PubMed articles for this assembly

Comparative genomics reveals insights into avian genome evolution and adaptation.
Comparative genomics reveals insights into avian genome evolution and adaptation.
Zhang G, Li C, Li Q, Li B, Larkin DM...

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ASM69924v1 - Genome - Assembly - NCBI
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Assembly Definition
Assembly Statistics

Global assembly definition

Download the full sequence report

The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

Primary Assembly

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
unplaced	1,069,324,295	58,607	1,065,718,737	49,530	48,553	0