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ASM70340v1

Organism name:
Apaloderma vittatum (bar-tailed trogon)
Isolate:
BGI_N311
Sex:
male
BioSample:
SAMN02318033
BioProject:
PRJNA212878
Submitter:
BGI
Date:
2014/06/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000703405.1 (latest)
RefSeq assembly accession:
GCF_000703405.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMFV01
Assembly method:
SOAPdenovo v. 1.6
Genome coverage:
28x
Sequencing technology:
Illumina HiSeq

IDs: 187811 [UID] 1137458 [GenBank] 1363098 [RefSeq]

See Genome Information for Apaloderma vittatum

Pathogen Detection Resources

History (Show revision history)

Comment

Annotation was added to this genome in September, 2014.

Global statistics

Total sequence length1,070,836,417
Total ungapped length1,066,296,614
Gaps between scaffolds0
Number of scaffolds54,728
Scaffold N5056,673
Scaffold L505,440
Number of contigs105,649
Contig N5028,882
Contig L5010,934
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)105,649

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Assembly Information

Related Information

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,070,836,41754,7281,066,296,61456,67350,9210