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NC01

Organism name:
Notothenia coriiceps (black rockcod)
Isolate:
Sejong01
Sex:
male
BioSample:
SAMN02206445
BioProject:
PRJNA66471
Submitter:
Antarctic Fish Genome Project
Date:
2014/07/29
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000735185.1 (latest)
RefSeq assembly accession:
GCF_000735185.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
AZAD01
Assembly method:
Celera Assembler v. 7.0
Expected final version:
no
Genome coverage:
38.0x
Sequencing technology:
Illumina HiSeq; 454; PacBio

IDs: 201541 [UID] 1181728 [GenBank] 1422838 [RefSeq]

See Genome Information for Notothenia coriiceps

History (Show revision history)

Comment

Global statistics

Total sequence length636,613,682
Total ungapped length623,350,671
Gaps between scaffolds0
Number of scaffolds38,657
Scaffold N50217,655
Scaffold L50458
Number of contigs72,571
Contig N5017,492
Contig L509,130
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)72,571

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced636,595,33538,656623,332,324217,65533,9140
MoleculeTotal
Length
Mitochondrion MT18,347