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ASM118610v1

Organism name:
Amyelois transitella (moths)
Infraspecific name:
Strain: UIUC subculture of SPIRL-1966
BioSample:
SAMN03009087
BioProject:
PRJNA254820
Submitter:
University of Illinois at Urbana-Champaign
Date:
2015/07/22
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_001186105.1 (latest)
RefSeq assembly accession:
GCF_001186105.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LACK01
Assembly method:
SOAPdenovo v. 2.04
Expected final version:
yes
Genome coverage:
36.0x
Sequencing technology:
Illumina HiSeq

IDs: 430371 [UID] 2027348 [GenBank] 2114748 [RefSeq]

See Genome Information for Amyelois transitella

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length406,468,287
Total ungapped length347,392,964
Gaps between scaffolds0
Number of scaffolds7,301
Scaffold N501,586,980
Scaffold L5062
Number of contigs47,095
Contig N5017,697
Contig L505,657
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)47,095

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced406,468,2877,301347,392,9641,586,98039,7940