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ASM130575v1

Organism name:
Equus asinus (ass)
Infraspecific name:
Breed: Guanzhong donkey
Isolate:
Maral har
Sex:
male
BioSample:
SAMN03010633
BioProject:
PRJNA259598
Submitter:
Inner Mongolian Agricultural University
Date:
2015/10/02
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_001305755.1 (latest)
RefSeq assembly accession:
GCF_001305755.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for GenBank version
WGS Project:
JREZ01
Assembly method:
Newbler v. 2.8
Expected final version:
yes
Genome coverage:
42.4x
Sequencing technology:
Illumina MiSeq; 454; Illumina HiSeq

IDs: 498271 [UID] 2366438 [GenBank] 2693668 [RefSeq]

See Genome Information for Equus asinus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,391,034,547
Total ungapped length2,357,920,133
Gaps between scaffolds0
Number of scaffolds2,166
Scaffold N503,776,412
Scaffold L50186
Number of contigs71,759
Contig N5066,737
Contig L509,906
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,166

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,391,034,5472,1662,357,920,1333,776,41269,5930