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_COMA2_

Organism name:
Candidatus Nitrospira nitrificans (bacteria)
Taxonomy check:
Inconclusive
Isolate:
COMA2
BioSample:
SAMEA3638996
BioProject:
PRJEB11446
Submitter:
Univie
Date:
2015/11/17
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001458775.1 (latest)
RefSeq assembly accession:
GCF_001458775.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CZPZ01
Genome coverage:
5x

IDs: 590921 [UID] 2705518 [GenBank] 4876228 [RefSeq]

See Genome Information for Candidatus Nitrospira nitrificans

History (Show revision history)

Comment

Global statistics

Total sequence length4,117,083
Total ungapped length4,117,083
Number of contigs36
Contig N50174,194
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)36

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,117,083364,117,083174,19400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Nitrospira nitrificansCandidatus Nitrospira nitrificans

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014203155.1Shinella fuscatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.220.050.05

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena