U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM165405v1

Organism name:
Hevea brasiliensis (rubber tree)
Infraspecific name:
Cultivar: reyan7-33-97
BioSample:
SAMN04451765
BioProject:
PRJNA310386
Submitter:
Rubber Research Institute
Date:
2016/06/01
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_001654055.1 (latest)
RefSeq assembly accession:
GCF_001654055.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd
  • Data displayed for GenBank version
WGS Project:
LVXX01
Assembly method:
SOAPdenovo v. 1.1
Expected final version:
yes
Genome coverage:
99.0x
Sequencing technology:
Illumina HiSeq

IDs: 751381 [UID] 3282278 [GenBank] 4681368 [RefSeq]

See Genome Information for Hevea brasiliensis

There are 6 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,373,365,927
Total ungapped length1,293,569,600
Gaps between scaffolds0
Number of scaffolds7,452
Scaffold N501,281,786
Scaffold L50320
Number of contigs48,314
Contig N5060,036
Contig L506,073
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7,452

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,373,365,9277,4521,293,569,6001,281,78640,8620