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ASM338704v1

Organism name:
Paracoccus versutus (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 582
BioSample:
SAMN04488022
BioProject:
PRJNA303497
Submitter:
DOE Joint Genome Institute
Date:
2018/08/14
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003387045.1 (latest)
RefSeq assembly accession:
GCF_003387045.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QUMX01
Assembly method:
AllPaths v. r46652
Expected final version:
no
Genome coverage:
182.0x
Sequencing technology:
Illumina HiSeq

IDs: 1864131 [UID] 7074808 [GenBank] 7097948 [RefSeq]

See Genome Information for Paracoccus versutus

There are 7 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,627,664
Total ungapped length5,625,517
Gaps between scaffolds0
Number of scaffolds114
Scaffold N50103,684
Scaffold L5016
Number of contigs125
Contig N50103,684
Contig L5016
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)114

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,627,6641145,625,517103,684110

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Paracoccus versutusParacoccus versutus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000763885.1Paracoccus versutustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000763885.1Paracoccus versutustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9897.0599.25
Best-match type99.9897.0599.25

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna