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amil_sf_1.1

Organism name:
Acropora millepora (stony corals)
Isolate:
SF001
BioSample:
SAMN09287627
BioProject:
PRJNA473876
Submitter:
Australian National University
Date:
2019/02/06
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_004143615.1 (latest)
RefSeq assembly accession:
GCF_004143615.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QTZP01
Assembly method:
AllPaths v. 45633
Expected final version:
yes
Genome coverage:
311.0x
Sequencing technology:
Illumina HiSeq

IDs: 2230541 [UID] 8403398 [GenBank] 8665268 [RefSeq]

See Genome Information for Acropora millepora

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length386,599,652
Total ungapped length349,023,121
Gaps between scaffolds0
Number of scaffolds3,869
Scaffold N50494,532
Scaffold L50223
Number of contigs20,440
Contig N5036,677
Contig L502,485
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,869

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced386,599,6523,869349,023,121494,53216,5710