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ASM1117012v1

Organism name:
Streptomyces diastaticus subsp. diastaticus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: NBRC:13412
Infraspecific name:
Strain: NBRC 13412
BioSample:
SAMD00206924
BioProject:
PRJDB9341
Submitter:
Biological Resource Center, National Institute of Technology and Evaluation (NBRC)
Date:
2020/02/27
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_011170125.1 (latest)
RefSeq assembly accession:
GCF_011170125.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BLLN01
Assembly method:
SMRT Link v. 6.0
Genome coverage:
460x
Sequencing technology:
SMRT Sequel

IDs: 6146781 [UID] 17483608 [GenBank] 22446248 [RefSeq]

See Genome Information for Streptomyces diastaticus

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Annotated using prokka 1.11 from http://www.vicbioinformatics.com. Annotated at DFAST https://dfast.nig.ac.jp/

Global statistics

Total sequence length7,083,172
Total ungapped length7,083,172
Number of contigs9
Contig N502,193,358
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)9

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,083,17297,083,1722,193,35800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces diastaticus subsp. diastaticusStreptomyces diastaticus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014648935.1Streptomyces diastaticus subsp. diastaticussuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014648935.1Streptomyces diastaticussuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9997.9299.35
Best-match type99.9997.9299.35

ANI result

Taxonomy check statusBest match statusComment
OKsubspecies-matchna