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ASM1120745v1

Organism name:
Thermosulfuriphilus ammonigenes (bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ST65
BioSample:
SAMN14116118
BioProject:
PRJNA606893
Submitter:
Research Center of Biotechnology RAS
Date:
2020/03/12
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_011207455.1 (latest)
RefSeq assembly accession:
GCF_011207455.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
Unicycler v. 0.4.8-beta
Expected final version:
yes
Genome coverage:
89.0x
Sequencing technology:
Illumina nanoMiSeq and PacBio Sequel

IDs: 6156281 [UID] 17535188 [GenBank] 17948688 [RefSeq]

See Genome Information for Thermosulfuriphilus ammonigenes

There are 2 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::04/19/2022 11:44:21
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.1
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::2,248
CDSs (total)::2,193
Genes (coding)::2,182
CDSs (with protein)::2,182
Genes (RNA)::55
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::48
ncRNAs::4
Pseudo Genes (total)::11
CDSs (without protein)::11
Pseudo Genes (ambiguous residues)::0 of 11
Pseudo Genes (frameshifted)::1 of 11
Pseudo Genes (incomplete)::11 of 11
Pseudo Genes (internal stop)::0 of 11
Pseudo Genes (multiple problems)::1 of 11
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,287,345
Total ungapped length2,287,345
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_011207485.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP048877.1=NZ_CP048877.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,287,345

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Thermosulfuriphilus ammonigenesThermosulfuriphilus ammonigenes

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_013761125.1Thermosulfuriphilus ammonigenestype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_013761125.1Thermosulfuriphilus ammonigenestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.0099.77100.00
Best-match type100.0099.77100.00

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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